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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2016790_2018484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2016790 - 2018484

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCGCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGACAT

U12 Branch Point Sequence:

GTGTGAGGACAT

Flanking Amino Acid:

SYTNGIDMNAVLKGFPDCLQ

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

47.5

-0.1

1.3

52.5

43.3

Major PPT

78.8

0.65

0.8

73.1

31.8

Minor 5ss

-2.5

33.4

41.6

Minor BPS

30.3

-1.4

2.4

47.82

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014745

2012240 - 2040187

27948