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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2022275_2029427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2022275 - 2029427

Intron Length:

7153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGCA

5'SS Class:

major

3'SS Sequence:

GAGCTGCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCTCACCGAGCT

Flanking Amino Acid:

FDGVAIDYGKPGRAIWLQGW

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

40.2

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

61.3

0.25

50.3

43.6

Minor 5ss

42.2

-0.9

3.2

56.9

47.3

Minor BPS

42.9

-0.4

2.1

64.7

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014745

2012240 - 2040187

27948