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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2051735_2052280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2051735 - 2052280

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGGAGCTGATTT

Flanking Amino Acid:

YQSKEAGNLLGEAMKLGFSK

Intron Amino Acid Position:

1192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

41.3

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

85.9

0.81

0.7

81.2

23.8

Minor 5ss

32.6

-2

3.1

33.4

41.6

Minor BPS

42.8

-0.4

58.23

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027033

2050936 - 2064347

13412