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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2052404_2052827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2052404 - 2052827

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGGCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GTGTCCTCACCC

Flanking Amino Acid:

FHIPANVPYIRYFVSFVIQF

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

66.5

0.37

55.2

41.3

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

0.17

1.9

67.46

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027033

2050936 - 2064347

13412

ENSAPLT00000021348

2050621 - 2064347

13727

ENSAPLT00000014983

2050621 - 2067124

16504