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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2053277_2053497_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2053277 - 2053497

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CCACTCCGGACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTGCTCACACTT

Flanking Amino Acid:

KLLDQVTENEESDINYLMSV

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

57.5

0.17

1.1

52.8

36.6

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

42.9

-0.4

1.9

62.03

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027033

2050936 - 2064347

13412

ENSAPLT00000021348

2050621 - 2064347

13727

ENSAPLT00000014983

2050621 - 2067124

16504