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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2054385_2054677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2054385 - 2054677

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCAAAT

U12 Branch Point Sequence:

TTGCCCCTCACC

Flanking Amino Acid:

VDATPAMKEQGWTPKMMFEE

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

55.9

0.15

61.2

32.6

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

0.01

2.1

68.8

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027033

2050936 - 2064347

13412

ENSAPLT00000021348

2050621 - 2064347

13727

ENSAPLT00000014983

2050621 - 2067124

16504