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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2058627_2060338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2058627 - 2060338

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGGCAG

5'SS Class:

major

3'SS Sequence:

CTGTTTCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCCTTCCCAACC

Flanking Amino Acid:

GLLSSATEDAESNINYLLKM

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

53.1

45.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

78.4

0.64

0.9

73.7

35.9

Minor 5ss

35.7

-1.6

3.2

38.2

46.8

Minor BPS

49.5

-0

1.9

62.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014983

2050621 - 2067124

16504

ENSAPLT00000027033

2050936 - 2064347

13412

ENSAPLT00000021348

2050621 - 2064347

13727