Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_2175579_2186980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2175579 - 2186980

Intron Length:

11402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTTTGTAATT

Flanking Amino Acid:

TLESRDSGIIATLTSYSENV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.1

0.61

75.7

33.2

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

58.3

0.34

78.42

39.1

Associated Gene:

Gene:

TANC2

Ensembl Gene ID:

ENSAPLG00000015374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016062

2087814 - 2298731

210918

ENSAPLT00000023682

2087814 - 2298731

210918