Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_2187168_2193014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2187168 - 2193014

Intron Length:

5847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAG

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGAAT

U12 Branch Point Sequence:

TGCCCGTTGAAT

Flanking Amino Acid:

YSMEVQDENQTSAGTQRISP

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

44.7

Major BPS

56.8

0.17

1.6

69.7

44.2

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

28.4

-2.5

3.5

37.7

47.1

Minor BPS

47.4

-0.1

2.2

66.68

43.8

Associated Gene:

Gene:

TANC2

Ensembl Gene ID:

ENSAPLG00000015374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023682

2087814 - 2298731

210918

ENSAPLT00000016062

2087814 - 2298731

210918