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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2375771_2379035_F

Intron Information:

Intron Rank:

140991

Intron Class:

major

Intron Phase:

Intron Coordinates:

2375771 - 2379035

Intron Length:

3265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.1

75.3

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.9

35.3

Minor 5ss

42.4

-0.8

2.9

60.3

Minor BPS

64.2

0.44

1.5

78.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022166

2374856 - 2379075

4220