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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2383802_2392186_F

Intron Information:

Intron Rank:

140989

Intron Class:

major

Intron Phase:

Intron Coordinates:

2383802 - 2392186

Intron Length:

8385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAG

U12 Branch Point Sequence:

AGTTCAGTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

85.3

32.2

Major BPS

0.32

1.6

71.9

Major PPT

87.5

0.84

0.7

81.2

36.5

Minor 5ss

45.8

-0.4

2.6

41.5

Minor BPS

44.6

-0.4

2.5

62.76

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021727

2383775 - 2392910

9136