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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2419817_2420357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2419817 - 2420357

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CTGCATTTCACC

Flanking Amino Acid:

RVEESSFSRAALPENTTAIA

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

75.4

0.57

0.7

68.7

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

46.5

-0.2

1.9

56.14

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028453

2419596 - 2423020

3425