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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2420385_2420604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2420385 - 2420604

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

GTTGCCATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATGTACT

Flanking Amino Acid:

TMGVICKIPRVEESSFSRAA

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

74.3

0.55

66.7

39.3

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

52.4

0.16

2.1

78.39

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028453

2419596 - 2423020

3425