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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2421193_2421454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2421193 - 2421454

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CTTTCTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CTTTCTTCCACA

Flanking Amino Acid:

QKDAMRRCQKVGGTVLSIQD

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

0.5

1.1

71.2

35.2

Major PPT

84.5

0.78

0.7

79.8

25.8

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

54.9

0.15

71.01

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028453

2419596 - 2423020

3425