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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2458257_2459927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2458257 - 2459927

Intron Length:

1671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CTTCTCTCCACA

Flanking Amino Acid:

GRGGFSEVYKAFDLTEQRYV

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

81.3

0.71

0.7

26.2

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

48.6

-0.1

64.43

42.1

Associated Gene:

Gene:

TLK2

Ensembl Gene ID:

ENSAPLG00000001568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020227

2451467 - 2506911

55445

ENSAPLT00000038030

2451467 - 2491653

40187

ENSAPLT00000001909

2451467 - 2506911

55445

ENSAPLT00000035710

2451467 - 2506997

55531

ENSAPLT00000025693

2451467 - 2506911

55445

ENSAPLT00000023672

2451467 - 2506997

55531