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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2460419_2463167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2460419 - 2463167

Intron Length:

2749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

CCTTTTGGAAAC

Flanking Amino Acid:

FKLRLGHLKKEEAEIQAELE

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

84.1

0.77

0.8

80.4

31.6

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

42.4

-0.6

2.1

51.07

40.4

Associated Gene:

Gene:

TLK2

Ensembl Gene ID:

ENSAPLG00000001568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020227

2451467 - 2506911

55445

ENSAPLT00000038030

2451467 - 2491653

40187

ENSAPLT00000001909

2451467 - 2506911

55445

ENSAPLT00000035710

2451467 - 2506997

55531

ENSAPLT00000025693

2451467 - 2506911

55445

ENSAPLT00000023672

2451467 - 2506997

55531