Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_2463235_2467064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2463235 - 2467064

Intron Length:

3830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTACGTTAT

5'SS Class:

major

3'SS Sequence:

CACTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGAAATTTGACA

Flanking Amino Acid:

KNKTNGAENETLTLAEYHEQ

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

75.1

37.7

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

82.1

0.72

0.8

76.3

31.8

Minor 5ss

42.2

-0.9

3.1

56.6

41.6

Minor BPS

52.1

0.06

1.5

61.76

37.7

Associated Gene:

Gene:

TLK2

Ensembl Gene ID:

ENSAPLG00000001568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035710

2451467 - 2506997

55531

ENSAPLT00000001909

2451467 - 2506911

55445

ENSAPLT00000025693

2451467 - 2506911

55445

ENSAPLT00000023672

2451467 - 2506997

55531

ENSAPLT00000038030

2451467 - 2491653

40187

ENSAPLT00000020227

2451467 - 2506911

55445