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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2470265_2471702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2470265 - 2471702

Intron Length:

1438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

ACTTAGTCAAAG

Flanking Amino Acid:

KEGRIDDLLRANCDLRRQID

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

0.61

0.9

36.7

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

41.1

-0.8

2.3

48.41

44.5

Associated Gene:

Gene:

TLK2

Ensembl Gene ID:

ENSAPLG00000001568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025693

2451467 - 2506911

55445

ENSAPLT00000023672

2451467 - 2506997

55531

ENSAPLT00000020227

2451467 - 2506911

55445

ENSAPLT00000038030

2451467 - 2491653

40187

ENSAPLT00000001909

2451467 - 2506911

55445

ENSAPLT00000035710

2451467 - 2506997

55531