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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2471796_2478203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2471796 - 2478203

Intron Length:

6408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GTTCTATTAAAT

Flanking Amino Acid:

PQHSLSNPLPSDLTMEKISA

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.8

38.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

93.1

0.97

0.6

88.4

21.4

Minor 5ss

40.4

-1.1

3.4

56.2

Minor BPS

58.1

0.33

1.7

76.95

38.6

Associated Gene:

Gene:

TLK2

Ensembl Gene ID:

ENSAPLG00000001568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025693

2451467 - 2506911

55445