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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2509390_2511165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2509390 - 2511165

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAG

U12 Branch Point Sequence:

AGACTGTTGAGT

Flanking Amino Acid:

IFVLSAILPEKMQCVVNRLS

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

57.3

0.18

1.6

57.1

49.4

Major PPT

82.5

0.73

0.8

80.8

31.2

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

41.9

-0.5

2.2

55.69

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005589

2507088 - 2522643

15556

ENSAPLT00000032015

2508335 - 2521027

12693