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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2522644_2523159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2522644 - 2523159

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCTAT

U12 Branch Point Sequence:

TGTACTGTGACC

Flanking Amino Acid:

EAAIYMERLKESAPRSSSPY

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

56.1

0.15

1.5

58.5

47.9

Major PPT

74.8

0.56

0.9

68.8

37.1

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

50.2

-0

2.1

67.03

38.9

Associated Gene:

Gene:

EFCAB3

Ensembl Gene ID:

ENSAPLG00000022795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017710

2521246 - 2528515

7270