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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2524471_2524984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2524471 - 2524984

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CGCTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GCCTTGCTAACA

Flanking Amino Acid:

YSKLECAETDGEKAMNFSDF

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

75.6

0.58

0.9

68.6

37.3

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

44.9

-0.3

2.3

55.78

43.5

Associated Gene:

Gene:

EFCAB3

Ensembl Gene ID:

ENSAPLG00000022795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017710

2521246 - 2528515

7270