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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2537464_2539577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2537464 - 2539577

Intron Length:

2114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGGACATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CCCTCCTGGACA

Flanking Amino Acid:

CVRFKGQMCSGHGTCKCGDC

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

78.8

0.71

67.6

40.6

Major PPT

61.9

0.27

51.3

42.8

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

58.7

0.27

1.6

62.73

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017545

2533953 - 2552545

18593

ENSAPLT00000004655

2531807 - 2552545

20739