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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2540008_2540418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2540008 - 2540418

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGCTC

5'SS Class:

major

3'SS Sequence:

GCCCCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

GGTGCCAGCACT

Flanking Amino Acid:

SCMGLKIGDTVSFSIEAKVR

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

64.2

41.9

Major BPS

50.8

0.02

1.5

37.5

Major PPT

71.6

0.49

0.8

61.1

35.1

Minor 5ss

30.4

-2.2

3.4

42.7

44.4

Minor BPS

43.6

-0.4

2.2

63.66

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017545

2533953 - 2552545

18593

ENSAPLT00000004655

2531807 - 2552545

20739