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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2541431_2541577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2541431 - 2541577

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATCCA

5'SS Class:

major

3'SS Sequence:

TCCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

ACGTGTTTCAGG

Flanking Amino Acid:

DNFYSASTTLDYPSLGLMTE

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

66.7

38.6

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

76.1

0.59

0.7

68.3

31.9

Minor 5ss

-1.8

2.9

39.2

41.1

Minor BPS

39.3

-0.9

2.3

40.18

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017545

2533953 - 2552545

18593

ENSAPLT00000004655

2531807 - 2552545

20739