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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2542487_2542916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542487 - 2542916

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGTGCCCTGACC

Flanking Amino Acid:

PPEALKNPCYEIGETCLPMF

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

63.5

41.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

86.5

0.82

0.7

81.2

23.9

Minor 5ss

36.8

-1.5

2.9

42.7

37.7

Minor BPS

58.7

0.26

1.8

71.65

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017545

2533953 - 2552545

18593

ENSAPLT00000004655

2531807 - 2552545

20739