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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2543170_2545034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2543170 - 2545034

Intron Length:

1865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TGCCATATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGATCTCTCACT

Flanking Amino Acid:

PQRIELKLRPDDSQIFQVQV

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.3

36.4

Major BPS

72.7

0.56

30.1

Major PPT

72.8

0.51

65.1

39.7

Minor 5ss

34.6

-1.8

3.5

42.5

44.6

Minor BPS

50.9

0.11

2.1

74.33

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004655

2531807 - 2552545

20739

ENSAPLT00000017545

2533953 - 2552545

18593