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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2548993_2552487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2548993 - 2552487

Intron Length:

3495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

TTTGCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CAGGTGGTGACA

Flanking Amino Acid:

ILVLCAAGSWGGNICTTRGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.8

38.3

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

81.6

0.71

0.9

73.1

42.1

Minor 5ss

44.3

-0.6

3.2

57.9

46.7

Minor BPS

-1.1

2.4

41.29

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004655

2531807 - 2552545

20739

ENSAPLT00000017545

2533953 - 2552545

18593