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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2584949_2585338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2584949 - 2585338

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

TCTTTCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TGCCACTCATTT

Flanking Amino Acid:

SECVTERTEQAVSIIHRIPL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

85.9

0.81

0.6

84.7

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

44.1

-0.3

1.9

59.65

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038886

2582492 - 2588908

6417