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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2586481_2586636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2586481 - 2586636

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAG

U12 Branch Point Sequence:

TTTTCTCTCACA

Flanking Amino Acid:

VLQTFHYSIFGYHMPGGLEI

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

69.4

36.6

Major BPS

60.2

0.25

1.6

61.1

45.5

Major PPT

88.5

0.87

0.6

24.1

Minor 5ss

29.2

-2.4

2.7

30.5

36.3

Minor BPS

60.1

0.31

2.1

79.78

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038886

2582492 - 2588908

6417