Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_2614754_2616544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2614754 - 2616544

Intron Length:

1791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCACCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

GGTTCCTAAATG

Flanking Amino Acid:

SVFYCFLNSEVRSAVRKRWH

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

72.7

0.57

72.1

31.1

Major PPT

70.3

0.46

59.6

41.9

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

0.24

1.8

64.89

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013712

2614613 - 2646781

32169