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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2616907_2618656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2616907 - 2618656

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GGTGGCTCAGCT

Flanking Amino Acid:

ASTTSETIQYRKAVKATLVL

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

78.4

0.64

0.8

70.1

36.5

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

43.5

-0.4

2.2

61.89

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013712

2614613 - 2646781

32169