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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2710723_2714821_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2710723 - 2714821

Intron Length:

4099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAATTTAC

5'SS Class:

major

3'SS Sequence:

CACAGCAAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTTAT

U12 Branch Point Sequence:

TCTCCCTGCAGC

Flanking Amino Acid:

YTLAIPMLNPSILEIVIGDN

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

64.6

Major BPS

57.4

0.18

1.3

49.2

Major PPT

49.2

-0

40.4

36.7

Minor 5ss

43.5

-0.7

2.8

62.5

42.1

Minor BPS

46.3

-0.3

2.2

60.44

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000832

2709147 - 2714854

5708