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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2733983_2735062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2733983 - 2735062

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

AATTCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

AAAAGTTTAAAG

Flanking Amino Acid:

AATKKASAAKDNQPSIMDIL

Intron Amino Acid Position:

1375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

77.5

0.62

73.8

40.7

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

45.2

-0.5

1.9

46.06

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036