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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2735189_2735495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2735189 - 2735495

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATGTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTCTTTCTATGT

Flanking Amino Acid:

KQKSVKGDIPVKGQAVADEN

Intron Amino Acid Position:

1333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

82.6

0.73

0.9

81.4

35.2

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

45.3

-0.2

2.1

67.24

44.2

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036