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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2736427_2736727_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2736427 - 2736727

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

CGATATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

CTCCCGATATTT

Flanking Amino Acid:

RIAQKRNVVQGTKRQATLPF

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.8

27.8

Major BPS

0.42

1.4

71.4

45.1

Major PPT

76.7

0.6

0.9

41.6

Minor 5ss

37.7

-1.4

2.9

52.3

44.3

Minor BPS

40.1

-0.6

2.3

57.67

45.5

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036