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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2736834_2737789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2736834 - 2737789

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CTGCTTTTATCT

Flanking Amino Acid:

AEKRAKKKVKSEKNELDENQ

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

87.6

0.85

0.7

85.5

27.9

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

53.2

0.18

1.6

68.16

43.3

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036