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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2742311_2742833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2742311 - 2742833

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CAATTTTTAACT

Flanking Amino Acid:

AEMSSYHHGEASLMMTIINL

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.4

35.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

81.7

0.71

0.8

76.4

30.6

Minor 5ss

34.5

-1.8

40.9

39.3

Minor BPS

71.1

0.74

1.2

77.26

39.3

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036