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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2746935_2747194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2746935 - 2747194

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTGACTTGACT

Flanking Amino Acid:

VPKLDDANDAGSKNSIDCTL

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

66.2

0.59

1.6

82.63

38.5

Associated Gene:

Gene:

TOP2A

Ensembl Gene ID:

ENSAPLG00000006390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006805

2732019 - 2751054

19036