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Intron Name: Anas_platyrhynchos_platyrhynchos_28_276846_282712_R

Intron Information:

Intron Rank:

151998

Intron Class:

major

Intron Phase:

Intron Coordinates:

276846 - 282712

Intron Length:

5867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TCATCTCCAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

87.2

0.84

0.8

84.6

30.3

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

48.4

-0.1

1.8

59.95

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037946

275829 - 283131

7303