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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2826664_2827353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2826664 - 2827353

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TATTTCATTACA

Flanking Amino Acid:

KEEESAPMETEEPHPEESTE

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.1

81.5

32.7

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.77

0.8

77.8

Minor 5ss

41.8

-0.9

3.2

58.1

46.5

Minor BPS

56.8

0.21

1.9

73.15

38.5

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168

ENSAPLT00000008458

2826452 - 2836999

10548