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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2827565_2828116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2827565 - 2828116

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACAACTC

5'SS Class:

major

3'SS Sequence:

TTTTATTTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

TESFNNELKRLCSLKVEVDM

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.28

1.1

54.3

43.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

78.1

0.63

73.8

41.4

Minor 5ss

34.4

-1.8

3.5

42.2

44.8

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168

ENSAPLT00000008458

2826452 - 2836999

10548