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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2828219_2829174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2828219 - 2829174

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TATTTATTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATTT

Flanking Amino Acid:

RQVQSLMVHQRKLEAELLQI

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

86.2

0.81

0.8

40.1

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

59.9

0.39

1.7

79.07

37.4

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168

ENSAPLT00000008458

2826452 - 2836999

10548