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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2832023_2833534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2832023 - 2833534

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGA

5'SS Class:

strong_major

3'SS Sequence:

GGTCACGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

GTGCAATCAAAC

Flanking Amino Acid:

EYLNEYEAEKIEYNESMKAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.8

35.6

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

67.6

0.4

61.8

44.1

Minor 5ss

31.4

-2.1

3.2

40.8

45.4

Minor BPS

41.1

-0.6

1.9

49.28

39.5

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168

ENSAPLT00000008458

2826452 - 2836999

10548