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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2833667_2834764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2833667 - 2834764

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTGTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATATCATTAGTA

Flanking Amino Acid:

LMPYMRYSRKVWDQVKASNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

83.2

30.8

Major BPS

79.4

0.73

80.1

Major PPT

70.9

0.47

1.1

75.7

38.5

Minor 5ss

32.5

-2

3.1

41.3

45.3

Minor BPS

55.8

0.18

1.8

68.28

37.8

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168

ENSAPLT00000008458

2826452 - 2836999

10548