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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2834846_2837175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2834846 - 2837175

Intron Length:

2330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAGAA

5'SS Class:

major

3'SS Sequence:

GGTTCTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

AGTACATTAACA

Flanking Amino Acid:

GNPGTNSRVTASSGITIPKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

62.6

38.1

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

0.54

0.9

68.6

37.3

Minor 5ss

28.8

-2.4

3.5

37.9

Minor BPS

0.47

1.6

73.32

37.4

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168