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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2837281_2840361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2837281 - 2840361

Intron Length:

3081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTGTTTCCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTGTCTCATTT

Flanking Amino Acid:

APPPTPAPATQMPSTPGFVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

78.4

37.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.2

0.66

0.9

79.1

34.3

Minor 5ss

41.2

-1

2.8

41.5

Minor BPS

51.8

0.13

1.9

75.31

42.2

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168