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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2840406_2840967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2840406 - 2840967

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TATATCTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATATCTTAACA

Flanking Amino Acid:

MSKRPSYAPPPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.1

0.57

70.2

39.7

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

77.8

0.87

1.2

81.28

33.4

Associated Gene:

Gene:

SMARCE1

Ensembl Gene ID:

ENSAPLG00000008102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027229

2824935 - 2842102

17168