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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2886088_2889713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2886088 - 2889713

Intron Length:

3626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

GTCTGTTGGATT

Flanking Amino Acid:

EQNVTDMQRQIEDGKITNAS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

46.6

-0.1

1.9

63.68

41.4

Associated Gene:

Gene:

KRT23

Ensembl Gene ID:

ENSAPLG00000008879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009247

2879749 - 2890130

10382