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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2908004_2908155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2908004 - 2908155

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAAAA

5'SS Class:

major

3'SS Sequence:

TTCCCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATGCAGT

Flanking Amino Acid:

KDAEAWFHSKTEELNREVAV

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.2

35.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.3

0.73

0.8

Minor 5ss

30.7

-2.2

3.2

39.2

46.2

Minor BPS

44.7

-0.3

2.4

69.74

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021729

2907127 - 2911177

4051

ENSAPLT00000009402

2905942 - 2911177

5236